BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB012F12SP1|AL426406
(831 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1713 1597 0.0
>3x_Contig1713
Length = 18539
Score = 1597 bits (803), Expect = 0.0
Identities = 822/831 (98%)
Strand = Plus / Minus
Query: 1 catctgcatatctgcttcgttatcccaagggaatgtccttccgttgtacatccatccgta 60
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3015 catctgcatatctgcatcgttatcccaagggaatgtccttccgttgtacatccatccgta 2956
Query: 61 catagtaccatgagmaaaccaagaaattaatccattagcctttacgaatttttggtagtt 120
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2955 catagtaccatgagccaaccaagaaattaatccattagcctttacgaatttttggtagtt 2896
Query: 121 tctgattaawgaatccaacctcatttccatttggaaagggtctgcgataagaggtccatt 180
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2895 tctgattaaagaatccaacctcatttccatttggaaagggtctgcgataagaggtccatt 2836
Query: 181 gaagaaccgtttatcgaaatggttaccgtatttcttgaacgactgawcatgagatgattc 240
|||||||||||||||||||||||||||| ||| ||||||||||||| |||||||||||||
Sbjct: 2835 gaagaaccgtttatcgaaatggttaccgaattacttgaacgactgaacatgagatgattc 2776
Query: 241 aaggaaatactttggtgcaaacgcataatggaaagamgtggaaaacttcaaagagtccaa 300
||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 2775 aaggaaatactttagtgcaaacgcataatggaaagaagtggaaaacttcaaagagtccaa 2716
Query: 301 atacgatttttcatgtggtgttagatcatcggaacgagcctctaactctttaatcttcgc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2715 atacgatttttcatgtggtgttagatcatcggaacgagcctctaactctttaatcttcgc 2656
Query: 361 catggcatcgaattcgaagtcattctcgttcaatacaacgtacggcatagaatcatcgga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2655 catggcatcgaattcgaagtcattctcgttcaatacaacgtacggcatagaatcatcgga 2596
Query: 421 ttggcgttgtttatttgcaataatctcatcgatgaccaccttgtgttcttttgcactatc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2595 ttggcgttgtttatttgcaataatctcatcgatgaccaccttgtgttcttttgcactatc 2536
Query: 481 cgattccacaaattgtttgaacttgttaatgtgatcgaacttgatcgatttacgaggcgt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2535 cgattccacaaattgtttgaacttgttaatgtgatcgaacttgatcgatttacgaggcgt 2476
Query: 541 ctcagggccatggccatctataaaccgttgcaaccgaccggaagtgatgatatttttcct 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2475 ctcagggccatggccatctataaaccgttgcaaccgaccggaagtgatgatatttttcct 2416
Query: 601 agaatctctatcgaccaagtactggtaagattctttatccgagttcataatcgtgatcga 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2415 agaatctctatcgaccaagtactggtaagattctttatccgagttcataatcgtgatcga 2356
Query: 661 gagaggatgtaccaaagtgtttatgacgtatgacctggcctgtaattggtacacctccgg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2355 gagaggatgtaccaaagtgtttatgacgtatgacctggcctgtaattggtacacctccgg 2296
Query: 721 tctaactttatcaaataaatcaagcgttgctacaccgttatcgtaactcatcatcgtatc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2295 tctaactttatcaaataaatcaagcgttgctacaccgttatcgtaactcatcatcgtatc 2236
Query: 781 agtaagcgacccgttcccatcattacccaatttattgctcgttggccagtt 831
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2235 agtaagcgacccgttcccatcattacccaatttattgctcgttggccagtt 2185
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5462
Number of Sequences: 1807
Number of extensions: 5462
Number of successful extensions: 30
Number of sequences better than 1.0e-20: 1
length of query: 831
length of database: 10,358,551
effective HSP length: 16
effective length of query: 815
effective length of database: 10,329,639
effective search space: 8418655785
effective search space used: 8418655785
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (99.9 bits)